RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g25194.1 View Network Show in Genome Browser |
| Other Names | Os05g0316100 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14597766-14606210 Nucleotide Length: 1734 |
| Protein-coding | LOC_Os05g25194 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g07210 LOC_Os03g46470 LOC_Os03g29850 LOC_Os01g74110 LOC_Os04g58110 |
| Downstream Genes | LOC_Os08g10630 LOC_Os06g37010 LOC_Os08g36420 LOC_Os07g12890 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g25194.1 |
| Rice Genome Annotation | LOC_Os05g25194.1 |
| Ricechip | LOC_Os05g25194.1 |
| KEGG | osa:4338391 dosa:Os05t0316100-01 |
| Entrez-Gene | 4338391 |