RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g25310.2 View Network Show in Genome Browser |
| Other Names | Os05g0317200 |
| Description | acyl-CoA synthetase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 14688251-14701325 Nucleotide Length: 2181 |
| Protein-coding | LOC_Os05g25310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32490 LOC_Os01g11300 LOC_Os03g12900 LOC_Os02g01920 LOC_Os01g11340 LOC_Os03g12910 LOC_Os01g11270 LOC_Os01g11280 LOC_Os04g33190 LOC_Os01g51170 LOC_Os04g51630 More.. |
| Downstream Genes | LOC_Os10g37210 LOC_Os11g18880 LOC_Os12g04990 LOC_Os08g40180 LOC_Os11g04980 LOC_Os08g13690 LOC_Os11g16410 LOC_Os05g48310 LOC_Os05g48220 LOC_Os05g44340 LOC_Os07g44660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g25310.2 |
| Rice Genome Annotation | LOC_Os05g25310.2 |
| Ricechip | LOC_Os05g25310.2 |
| KEGG | osa:4338395 dosa:Os05t0317200-01 |
| Entrez-Gene | 4338395 |