RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g25840.1 View Network Show in Genome Browser |
| Other Names | Os05g0323800 |
| Description | ELMO/CED-12 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 15040797-15044759 Nucleotide Length: 1563 |
| Protein-coding | LOC_Os05g25840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74520 LOC_Os04g42870 LOC_Os01g66150 LOC_Os01g51530 LOC_Os01g67730 LOC_Os02g10430 LOC_Os02g47510 LOC_Os01g01160 |
| Downstream Genes | LOC_Os08g21330 LOC_Os12g02350 LOC_Os06g43610 LOC_Os12g19530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g25840.1 |
| Rice Genome Annotation | LOC_Os05g25840.1 |
| Ricechip | LOC_Os05g25840.1 |
| KEGG | osa:4338416 dosa:Os05t0323800-01 |
| Entrez-Gene | 4338416 |