RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g26890.1 View Network Show in Genome Browser |
| Other Names | Os05g0333200 |
| Description | G-protein alpha subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 15609844-15613483 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os05g26890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005102 | receptor binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46650 LOC_Os03g17700 LOC_Os01g59360 LOC_Os02g55410 LOC_Os01g39770 LOC_Os01g43410 LOC_Os03g54780 LOC_Os04g47300 LOC_Os02g11890 LOC_Os01g51170 LOC_Os01g51420 More.. |
| Downstream Genes | LOC_Os06g06090 LOC_Os05g39850 LOC_Os08g15040 LOC_Os05g27520 LOC_Os05g26926 LOC_Os05g26902 LOC_Os05g41270 LOC_Os11g04170 LOC_Os12g03970 LOC_Os06g09930 LOC_Os06g39050 More.. |
| Reference | |
|---|---|
| PubMed | 19541604 20040584 17117160 7767602 11027362 10468600 10377457 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g26890.1 |
| Rice Genome Annotation | LOC_Os05g26890.1 |
| Ricechip | LOC_Os05g26890.1 |
| KEGG | osa:4338448 dosa:Os05t0333200-00 |
| Entrez-Gene | 4338448 |