RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g26954.1 View Network Show in Genome Browser |
| Other Names | Os05g0334400 |
| Description | saposin-like type B, region 1 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 15656657-15662493 Nucleotide Length: 984 |
| Protein-coding | LOC_Os05g26954 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36419 LOC_Os03g11520 LOC_Os03g12670 LOC_Os02g02524 LOC_Os01g56930 LOC_Os03g49520 LOC_Os02g13400 |
| Downstream Genes | LOC_Os09g03310 LOC_Os08g34879 LOC_Os06g05870 LOC_Os11g06934 LOC_Os06g04399 LOC_Os07g28910 LOC_Os11g48090 LOC_Os10g29274 LOC_Os08g41850 LOC_Os08g21590 LOC_Os12g41962 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g26954.1 |
| Rice Genome Annotation | LOC_Os05g26954.1 |
| Ricechip | LOC_Os05g26954.1 |
| KEGG | osa:4338452 dosa:Os05t0334400-01 |
| Entrez-Gene | 4338452 |