RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g27000.1 View Network Show in Genome Browser |
| Other Names | Os05g0335500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 15698625-15700879 Nucleotide Length: 681 |
| Protein-coding | LOC_Os05g27000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g33650 LOC_Os02g19970 LOC_Os03g20120 |
| Downstream Genes | LOC_Os05g33600 LOC_Os05g33590 LOC_Os06g04790 LOC_Os07g48830 LOC_Os07g07230 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g27000.1 |
| Rice Genome Annotation | LOC_Os05g27000.1 |
| Ricechip | LOC_Os05g27000.1 |
| KEGG | osa:4338455 dosa:Os05t0335500-00 |
| Entrez-Gene | 4338455 |