RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g27100.1 View Network Show in Genome Browser |
| Other Names | Os05g0337400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 15770497-15773664 Nucleotide Length: 495 |
| Protein-coding | LOC_Os05g27100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10060 LOC_Os01g59060 LOC_Os03g03020 LOC_Os03g15870 LOC_Os02g15900 LOC_Os03g60100 LOC_Os01g48690 LOC_Os02g04460 LOC_Os01g54540 LOC_Os03g03360 LOC_Os03g17580 More.. |
| Downstream Genes | LOC_Os09g10760 LOC_Os06g49160 LOC_Os07g33660 LOC_Os05g49060 LOC_Os06g22690 LOC_Os07g38300 LOC_Os12g34890 LOC_Os12g17910 LOC_Os06g45340 LOC_Os09g39180 LOC_Os11g02450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g27100.1 |
| Rice Genome Annotation | LOC_Os05g27100.1 |
| Ricechip | LOC_Os05g27100.1 |
| KEGG | osa:4338460 dosa:Os05t0337400-01 |
| Entrez-Gene | 4338460 |