RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g27520.1 View Network Show in Genome Browser
Other Names	Os05g0341300
Description	expressed protein
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 16007502-16011146 Nucleotide Length: 501
Protein-coding	LOC_Os05g27520

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0008219	cell death	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0030234	enzyme regulator activity	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005102	receptor binding	Molecular Function	IEA
GO:0004871	signal transducer activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g26926 LOC_Os05g26902 LOC_Os05g26890 LOC_Os02g18480 LOC_Os05g24601 LOC_Os03g15900 LOC_Os03g55130
Downstream Genes	LOC_Os08g15040 LOC_Os11g07280 LOC_Os06g09930

miRNA Regulations
miRNAs	osa-miR1861d

Database Links
Gramene	LOC_Os05g27520.1
Rice Genome Annotation	LOC_Os05g27520.1
Ricechip	LOC_Os05g27520.1
KEGG	osa:9272594 dosa:Os05t0341300-01
Entrez-Gene	9272594