RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g27790.1 View Network Show in Genome Browser |
| Other Names | Os05g0344400 |
| Description | membrane associated DUF588 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16202767-16203195 Nucleotide Length: 615 |
| Protein-coding | LOC_Os05g27790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g15630 LOC_Os04g21320 LOC_Os03g10870 LOC_Os02g12760 LOC_Os01g26120 LOC_Os03g21030 |
| Downstream Genes | LOC_Os12g41690 LOC_Os12g38100 LOC_Os12g32970 LOC_Os09g07480 LOC_Os07g26110 LOC_Os06g12500 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g27790.1 |
| Rice Genome Annotation | LOC_Os05g27790.1 |
| Ricechip | LOC_Os05g27790.1 |
| KEGG | osa:4338478 dosa:Os05t0344400-01 |
| Entrez-Gene | 4338478 |