RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g27880.1 View Network Show in Genome Browser |
| Other Names | Os05g0345500 |
| Description | BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16267416-16273966 Nucleotide Length: 2421 |
| Protein-coding | LOC_Os05g27880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74110 LOC_Os02g57290 LOC_Os04g52370 LOC_Os05g02510 LOC_Os04g51920 LOC_Os03g29240 LOC_Os03g29850 LOC_Os04g53720 LOC_Os01g57110 LOC_Os05g19270 LOC_Os04g14654 More.. |
| Downstream Genes | LOC_Os11g44810 LOC_Os12g18110 LOC_Os08g10600 LOC_Os06g03720 LOC_Os08g08220 LOC_Os09g24210 LOC_Os06g14620 LOC_Os05g37980 LOC_Os07g09720 LOC_Os09g06560 LOC_Os10g42950 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g27880.1 |
| Rice Genome Annotation | LOC_Os05g27880.1 |
| Ricechip | LOC_Os05g27880.1 |
| KEGG | osa:9271418 dosa:Os05t0345500-03 |
| Entrez-Gene | 9271418 |