RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g27960.1 View Network Show in Genome Browser |
| Other Names | Os05g0346500 |
| Description | hydrolase, acting on glycosyl bonds, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16320971-16321771 Nucleotide Length: 2133 |
| Protein-coding | LOC_Os05g27960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01280 LOC_Os04g48750 LOC_Os03g06510 LOC_Os02g10160 |
| Downstream Genes | LOC_Os12g33020 LOC_Os07g31460 LOC_Os10g42960 LOC_Os06g07830 LOC_Os10g13810 LOC_Os07g31140 LOC_Os08g12750 LOC_Os08g02140 LOC_Os12g38630 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g27960.1 |
| Rice Genome Annotation | LOC_Os05g27960.1 |
| Ricechip | LOC_Os05g27960.1 |
| KEGG | osa:4338487 dosa:Os05t0346500-01 |
| Entrez-Gene | 4338487 |