RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28090.1 View Network Show in Genome Browser |
| Other Names | Os05g0348100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16421495-16423221 Nucleotide Length: 594 |
| Protein-coding | LOC_Os05g28090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36750 LOC_Os01g68450 LOC_Os04g55180 LOC_Os01g66000 LOC_Os03g02640 LOC_Os01g70400 LOC_Os03g39830 LOC_Os01g32830 LOC_Os03g60100 LOC_Os02g53400 LOC_Os03g48040 More.. |
| Downstream Genes | LOC_Os08g32930 LOC_Os05g37830 LOC_Os08g19140 LOC_Os06g49160 LOC_Os07g05470 LOC_Os11g47730 LOC_Os07g43390 LOC_Os09g31970 LOC_Os08g40180 LOC_Os07g15670 LOC_Os09g26810 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28090.1 |
| Rice Genome Annotation | LOC_Os05g28090.1 |
| Ricechip | LOC_Os05g28090.1 |
| KEGG | osa:9269617 dosa:Os05t0348100-01 |
| Entrez-Gene | 9269617 |