RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28190.1 View Network Show in Genome Browser |
| Other Names | Os05g0349500 |
| Description | ranBP1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16502935-16506624 Nucleotide Length: 1419 |
| Protein-coding | LOC_Os05g28190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46480 LOC_Os03g18180 LOC_Os01g66330 LOC_Os01g23590 LOC_Os02g10020 LOC_Os01g54590 LOC_Os05g06470 LOC_Os01g55050 LOC_Os03g12460 LOC_Os02g13110 LOC_Os01g47730 More.. |
| Downstream Genes | LOC_Os05g28290 LOC_Os05g49890 LOC_Os07g09510 LOC_Os08g33390 LOC_Os06g35814 LOC_Os05g29870 LOC_Os05g46560 LOC_Os05g44070 LOC_Os08g45180 LOC_Os05g28510 LOC_Os09g15790 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28190.1 |
| Rice Genome Annotation | LOC_Os05g28190.1 |
| Ricechip | LOC_Os05g28190.1 |
| KEGG | osa:4338497 dosa:Os05t0349500-01 |
| Entrez-Gene | 4338497 |