RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28200.2 View Network Show in Genome Browser |
| Other Names | Os05g0349700 |
| Description | prenyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16512069-16517848 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os05g28200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34390 LOC_Os03g09060 LOC_Os03g52640 LOC_Os03g13000 LOC_Os02g58620 LOC_Os04g40830 LOC_Os03g50940 |
| Downstream Genes | LOC_Os08g23320 LOC_Os09g21460 LOC_Os07g47630 LOC_Os10g43050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28200.2 |
| Rice Genome Annotation | LOC_Os05g28200.2 |
| Ricechip | LOC_Os05g28200.2 |
| KEGG | osa:4338498 dosa:Os05t0349700-01 |
| Entrez-Gene | 4338498 |