RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28280.1 View Network Show in Genome Browser |
| Other Names | Os05g0350500 |
| Description | peptidase, M24 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16552218-16555972 Nucleotide Length: 1182 |
| Protein-coding | LOC_Os05g28280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57590 LOC_Os03g04590 LOC_Os02g56960 LOC_Os05g08360 LOC_Os03g21940 LOC_Os04g42270 LOC_Os02g54470 LOC_Os03g58430 LOC_Os01g67134 LOC_Os01g61814 LOC_Os04g50990 More.. |
| Downstream Genes | LOC_Os08g03640 LOC_Os08g02410 LOC_Os11g04070 LOC_Os12g03880 LOC_Os07g42450 LOC_Os09g24690 LOC_Os06g02510 LOC_Os06g48750 LOC_Os10g32550 LOC_Os08g06040 LOC_Os08g33920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28280.1 |
| Rice Genome Annotation | LOC_Os05g28280.1 |
| Ricechip | LOC_Os05g28280.1 |
| KEGG | osa:4338500 dosa:Os05t0350500-01 |
| Entrez-Gene | 4338500 |