RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g28320.1 View Network Show in Genome Browser
Other Names	Os05g0350900
Description	myb-like DNA-binding domain containing protein, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 16582170-16583287 Nucleotide Length: 912
Protein-coding	LOC_Os05g28320

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g22890 LOC_Os05g05450 LOC_Os01g40340 LOC_Os03g61200 LOC_Os04g52200 LOC_Os05g22920 LOC_Os02g12600 LOC_Os03g15120 LOC_Os01g65220 LOC_Os03g42770 LOC_Os04g58830 More..
Downstream Genes	LOC_Os05g51490 LOC_Os06g40120 LOC_Os09g19560 LOC_Os12g43830 LOC_Os06g01980 LOC_Os07g10350 LOC_Os06g47840 LOC_Os10g26660 LOC_Os09g30210 LOC_Os10g25110 LOC_Os08g42730 More..

miRNA Regulations
miRNAs	osa-miR5809

Database Links
Gramene	LOC_Os05g28320.1
Rice Genome Annotation	LOC_Os05g28320.1
Ricechip	LOC_Os05g28320.1
KEGG	osa:4338503 dosa:Os05t0350900-01
Entrez-Gene	4338503