RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g28350.1 View Network Show in Genome Browser
Other Names	Os05g0351200
Description	AP2 domain containing protein, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 16600597-16601813 Nucleotide Length: 810
Protein-coding	LOC_Os05g28350

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g60240 LOC_Os01g11040

miRNA Regulations
miRNAs	osa-miR5075

Database Links
Gramene	LOC_Os05g28350.1
Rice Genome Annotation	LOC_Os05g28350.1
Ricechip	LOC_Os05g28350.1
KEGG	osa:9271873 dosa:Os05t0351200-00
Entrez-Gene	9271873