RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28860.1 View Network Show in Genome Browser |
| Other Names | Os05g0357100 |
| Description | 3'-5' exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16918923-16923919 Nucleotide Length: 1743 |
| Protein-coding | LOC_Os05g28860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38620 |
| Downstream Genes | LOC_Os07g02180 LOC_Os08g07840 LOC_Os08g07850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28860.1 |
| Rice Genome Annotation | LOC_Os05g28860.1 |
| Ricechip | LOC_Os05g28860.1 |
| KEGG | osa:4338523 dosa:Os05t0357100-01 |
| Entrez-Gene | 4338523 |