RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28950.3 View Network Show in Genome Browser |
| Other Names | Os05g0357700 |
| Description | CAAX amino terminal protease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16972939-16975971 Nucleotide Length: 483 |
| Protein-coding | LOC_Os05g28950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45650 LOC_Os04g55220 LOC_Os02g25060 LOC_Os03g45170 LOC_Os01g60340 LOC_Os03g14700 LOC_Os04g51380 LOC_Os01g53600 LOC_Os05g06840 LOC_Os03g46390 LOC_Os02g11830 More.. |
| Downstream Genes | LOC_Os12g42850 LOC_Os09g36770 LOC_Os06g47130 LOC_Os08g20544 LOC_Os10g30090 LOC_Os07g22640 LOC_Os09g33930 LOC_Os06g04500 LOC_Os06g02570 LOC_Os06g09850 LOC_Os12g43550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28950.3 |
| Rice Genome Annotation | LOC_Os05g28950.3 |
| Ricechip | LOC_Os05g28950.3 |
| KEGG | osa:9268853 dosa:Os05t0357700-01 |
| Entrez-Gene | 9268853 |