RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g28960.1 View Network Show in Genome Browser |
| Other Names | Os05g0357800 |
| Description | acyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 16977288-16982192 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os05g28960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63580 LOC_Os01g57360 LOC_Os01g44069 LOC_Os04g57150 LOC_Os01g03549 |
| Downstream Genes | LOC_Os11g45400 LOC_Os11g41900 LOC_Os10g42720 LOC_Os05g38350 LOC_Os09g28480 LOC_Os10g35320 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00565 rn01100 |
| Metacyc Pathways | PHOSLIPSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g28960.1 |
| Rice Genome Annotation | LOC_Os05g28960.1 |
| Ricechip | LOC_Os05g28960.1 |
| KEGG | osa:4338527 dosa:Os05t0357800-01 |
| Entrez-Gene | 4338527 |