RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g29020.1 View Network Show in Genome Browser |
| Other Names | Os05g0358400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17014645-17018320 Nucleotide Length: 927 |
| Protein-coding | LOC_Os05g29020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01720 LOC_Os01g14140 |
| Downstream Genes | LOC_Os05g49170 LOC_Os06g14530 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g29020.1 |
| Rice Genome Annotation | LOC_Os05g29020.1 |
| Ricechip | LOC_Os05g29020.1 |
| KEGG | osa:4338530 dosa:Os05t0358400-01 |
| Entrez-Gene | 4338530 |