RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g29030.1 View Network Show in Genome Browser |
| Other Names | Os05g0358500 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17017159-17021936 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os05g29030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44870 LOC_Os01g09620 LOC_Os03g31490 LOC_Os02g44080 |
| Downstream Genes | LOC_Os08g13320 LOC_Os09g29404 LOC_Os08g42590 LOC_Os07g12530 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g29030.1 |
| Rice Genome Annotation | LOC_Os05g29030.1 |
| Ricechip | LOC_Os05g29030.1 |
| KEGG | osa:4338531 dosa:Os05t0358500-01 |
| Entrez-Gene | 4338531 |