RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g29860.1 View Network Show in Genome Browser |
| Other Names | Os05g0361900 |
| Description | mitochondrial carrier protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17276735-17280614 Nucleotide Length: 867 |
| Protein-coding | LOC_Os05g29860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61260 LOC_Os02g54710 LOC_Os04g56480 LOC_Os05g23720 LOC_Os04g25540 LOC_Os02g04460 LOC_Os03g61030 LOC_Os02g53680 LOC_Os02g10070 LOC_Os02g14860 LOC_Os02g05890 More.. |
| Downstream Genes | LOC_Os12g17910 LOC_Os07g30200 LOC_Os11g34210 LOC_Os05g49220 LOC_Os08g31228 LOC_Os08g31219 LOC_Os11g02450 LOC_Os11g33240 LOC_Os08g29110 LOC_Os07g30800 LOC_Os10g36860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g29860.1 |
| Rice Genome Annotation | LOC_Os05g29860.1 |
| Ricechip | LOC_Os05g29860.1 |
| KEGG | osa:4338540 dosa:Os05t0361900-01 |
| Entrez-Gene | 4338540 |