RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g29974.1 View Network Show in Genome Browser |
| Other Names | Os05g0363100 |
| Description | lipase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17336715-17344202 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os05g29974 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g19150 LOC_Os04g55180 LOC_Os03g27110 LOC_Os01g69060 LOC_Os01g44960 LOC_Os01g64010 |
| Downstream Genes | LOC_Os07g38830 LOC_Os07g48610 LOC_Os07g42140 LOC_Os05g34630 LOC_Os07g42994 LOC_Os07g41080 LOC_Os12g31410 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p osa-miR5338 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g29974.1 |
| Rice Genome Annotation | LOC_Os05g29974.1 |
| Ricechip | LOC_Os05g29974.1 |
| KEGG | osa:4338545 dosa:Os05t0363100-01 |
| Entrez-Gene | 4338545 |