RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g30010.1 View Network Show in Genome Browser |
| Other Names | Os05g0363566,Os05g0363500 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17361511-17368926 Nucleotide Length: 3885 |
| Protein-coding | LOC_Os05g30010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13980 LOC_Os01g02139 LOC_Os04g31410 LOC_Os01g51840 LOC_Os05g28520 LOC_Os02g44320 LOC_Os01g39830 LOC_Os02g58720 LOC_Os01g71474 LOC_Os03g28330 LOC_Os02g12730 More.. |
| Downstream Genes | LOC_Os11g26190 LOC_Os07g05470 LOC_Os07g38590 LOC_Os11g02350 LOC_Os10g40420 LOC_Os06g05550 LOC_Os08g24790 LOC_Os10g07210 LOC_Os11g08090 LOC_Os06g42800 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118h osa-miR2118k |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g30010.1 |
| Rice Genome Annotation | LOC_Os05g30010.1 |
| Ricechip | LOC_Os05g30010.1 |
| KEGG | osa:4338548 dosa:Os05t0363566-00dosa:Os05t0363500-01 |