RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g30140.2 View Network Show in Genome Browser |
| Other Names | Os05g0364600 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17446127-17453295 Nucleotide Length: 864 |
| Protein-coding | LOC_Os05g30140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g12850 LOC_Os02g58090 LOC_Os04g39444 LOC_Os02g39890 LOC_Os02g37430 LOC_Os01g72890 LOC_Os03g50850 LOC_Os02g52140 LOC_Os02g07070 LOC_Os02g39720 LOC_Os02g05310 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os10g06130 LOC_Os05g48960 LOC_Os06g45910 LOC_Os06g45900 LOC_Os11g14430 LOC_Os10g34380 LOC_Os08g01054 LOC_Os07g46180 LOC_Os11g41820 LOC_Os11g18830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g30140.2 |
| Rice Genome Annotation | LOC_Os05g30140.2 |
| Ricechip | LOC_Os05g30140.2 |
| KEGG | osa:4338552 dosa:Os05t0364600-01 |
| Entrez-Gene | 4338552 |