RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g30454.1 View Network Show in Genome Browser |
| Other Names | Os05g0367400 |
| Description | thiamin pyrophosphokinase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17644844-17649664 Nucleotide Length: 804 |
| Protein-coding | LOC_Os05g30454 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46100 LOC_Os04g31270 LOC_Os02g07720 LOC_Os05g26820 LOC_Os02g12670 LOC_Os01g53840 LOC_Os01g39970 LOC_Os03g17300 LOC_Os01g04490 LOC_Os05g12680 LOC_Os04g52140 More.. |
| Downstream Genes | LOC_Os06g36590 LOC_Os09g32810 LOC_Os08g39170 LOC_Os10g22890 LOC_Os08g05290 LOC_Os11g07180 LOC_Os06g44430 LOC_Os06g29340 LOC_Os06g41510 LOC_Os10g22860 LOC_Os10g39670 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00730 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g30454.1 |
| Rice Genome Annotation | LOC_Os05g30454.1 |
| Ricechip | LOC_Os05g30454.1 |
| KEGG | osa:4338566 dosa:Os05t0367400-01 |
| Entrez-Gene | 4338566 |