RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g30880.1 View Network Show in Genome Browser |
| Other Names | Os05g0372200 |
| Description | nucleolar matrix protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17932018-17933493 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os05g30880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22350 LOC_Os04g58830 LOC_Os01g33050 LOC_Os01g13730 LOC_Os03g58340 LOC_Os03g61560 LOC_Os03g51900 LOC_Os05g05220 LOC_Os02g38060 LOC_Os01g68310 LOC_Os02g49780 More.. |
| Downstream Genes | LOC_Os09g35670 LOC_Os05g41100 LOC_Os08g31810 LOC_Os07g19190 LOC_Os07g29320 LOC_Os11g01420 LOC_Os12g01430 LOC_Os10g31520 LOC_Os06g03780 LOC_Os07g03230 LOC_Os11g16480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g30880.1 |
| Rice Genome Annotation | LOC_Os05g30880.1 |
| Ricechip | LOC_Os05g30880.1 |
| KEGG | osa:4338593 dosa:Os05t0372200-00 |
| Entrez-Gene | 4338593 |