RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g30980.1 View Network Show in Genome Browser |
| Other Names | Os05g0373400 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 17995203-18001012 Nucleotide Length: 1401 |
| Protein-coding | LOC_Os05g30980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48680 LOC_Os03g59710 LOC_Os04g30430 LOC_Os01g65550 LOC_Os01g16090 LOC_Os03g15890 LOC_Os02g29480 LOC_Os04g35800 LOC_Os02g52140 LOC_Os02g51890 LOC_Os02g48340 More.. |
| Downstream Genes | LOC_Os08g28730 LOC_Os06g50890 LOC_Os06g20010 LOC_Os10g30370 LOC_Os07g47630 LOC_Os10g33230 LOC_Os06g11730 LOC_Os07g41180 LOC_Os11g41820 LOC_Os11g45590 LOC_Os06g11620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g30980.1 |
| Rice Genome Annotation | LOC_Os05g30980.1 |
| Ricechip | LOC_Os05g30980.1 |
| KEGG | osa:4338600 dosa:Os05t0373400-01 |
| Entrez-Gene | 4338600 |