RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31020.1 View Network Show in Genome Browser |
| Other Names | Os05g0373900 |
| Description | eukaryotic peptide chain release factor subunit 1-1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18016617-18020387 Nucleotide Length: 1323 |
| Protein-coding | LOC_Os05g31020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g20220 LOC_Os04g27860 LOC_Os02g27769 LOC_Os04g32710 LOC_Os01g62350 LOC_Os03g05980 LOC_Os03g38260 LOC_Os03g21940 LOC_Os03g18570 LOC_Os05g27940 LOC_Os04g42270 More.. |
| Downstream Genes | LOC_Os08g02340 LOC_Os05g38520 LOC_Os11g38959 LOC_Os11g24610 LOC_Os12g05430 LOC_Os07g47710 LOC_Os12g03090 LOC_Os11g03400 LOC_Os07g10660 LOC_Os06g35730 LOC_Os10g27174 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31020.1 |
| Rice Genome Annotation | LOC_Os05g31020.1 |
| Ricechip | LOC_Os05g31020.1 |
| KEGG | osa:4338603 dosa:Os05t0373900-01 |
| Entrez-Gene | 4338603 |