RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31160.1 View Network Show in Genome Browser |
| Other Names | Os05g0375600 |
| Description | peptide chain release factor 2, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18126333-18129661 Nucleotide Length: 1248 |
| Protein-coding | LOC_Os05g31160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g38980 LOC_Os02g41470 LOC_Os03g63950 LOC_Os01g21820 |
| Downstream Genes | LOC_Os11g08980 LOC_Os06g19480 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31160.1 |
| Rice Genome Annotation | LOC_Os05g31160.1 |
| Ricechip | LOC_Os05g31160.1 |
| KEGG | osa:4338612 dosa:Os05t0375600-00 |
| Entrez-Gene | 4338612 |