RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31220.1 View Network Show in Genome Browser |
| Other Names | Os05g0376200 |
| Description | cell division control protein 48 homolog B, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18158247-18161024 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os05g31220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os04g42110 LOC_Os03g62370 LOC_Os03g19990 LOC_Os05g08950 LOC_Os03g28980 LOC_Os02g44200 |
| Downstream Genes | LOC_Os07g44410 LOC_Os07g42632 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31220.1 |
| Rice Genome Annotation | LOC_Os05g31220.1 |
| Ricechip | LOC_Os05g31220.1 |
| KEGG | osa:4338614 dosa:Os05t0376200-00 |
| Entrez-Gene | 4338614 |