RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31620.1 View Network Show in Genome Browser |
| Other Names | Os05g0380900 |
| Description | OsCML15 - Calmodulin-related calcium sensor protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18406480-18407458 Nucleotide Length: 606 |
| Protein-coding | LOC_Os05g31620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50420 LOC_Os02g04130 LOC_Os01g70790 LOC_Os02g41510 LOC_Os01g72530 LOC_Os03g05750 LOC_Os04g58850 LOC_Os01g28790 LOC_Os02g45780 LOC_Os01g31370 LOC_Os01g04330 More.. |
| Downstream Genes | LOC_Os09g28440 LOC_Os07g48280 LOC_Os06g04240 LOC_Os06g46950 LOC_Os09g35010 LOC_Os12g05440 LOC_Os09g24580 |
| Reference | |
|---|---|
| PubMed | 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31620.1 |
| Rice Genome Annotation | LOC_Os05g31620.1 |
| Ricechip | LOC_Os05g31620.1 |
| KEGG | osa:4338633 dosa:Os05t0380900-01 |
| Entrez-Gene | 4338633 |