RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31770.1 View Network Show in Genome Browser |
| Other Names | Os05g0383000 |
| Description | tetratricopeptide repeat containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18502646-18505884 Nucleotide Length: 495 |
| Protein-coding | LOC_Os05g31770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21460 LOC_Os04g41960 LOC_Os01g69130 LOC_Os02g55980 LOC_Os03g56944 LOC_Os04g38450 LOC_Os01g66720 LOC_Os04g31190 LOC_Os01g44130 LOC_Os04g55480 LOC_Os02g09060 More.. |
| Downstream Genes | LOC_Os06g14620 LOC_Os06g03720 LOC_Os11g40150 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 LOC_Os11g14910 LOC_Os12g40780 LOC_Os12g31370 LOC_Os12g12514 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31770.1 |
| Rice Genome Annotation | LOC_Os05g31770.1 |
| Ricechip | LOC_Os05g31770.1 |
| KEGG | osa:4338647 dosa:Os05t0383000-01 |
| Entrez-Gene | 4338647 |