RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31780.2 View Network Show in Genome Browser |
| Other Names | Os05g0383100 |
| Description | adaptor complexes medium subunit family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18508440-18512695 Nucleotide Length: 1245 |
| Protein-coding | LOC_Os05g31780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g24601 LOC_Os01g61710 LOC_Os02g33180 LOC_Os05g22670 LOC_Os01g16100 |
| Downstream Genes | LOC_Os08g28080 LOC_Os12g08260 LOC_Os12g34370 LOC_Os06g07090 LOC_Os11g16540 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31780.2 |
| Rice Genome Annotation | LOC_Os05g31780.2 |
| Ricechip | LOC_Os05g31780.2 |
| KEGG | osa:4338648 dosa:Os05t0383100-01 |
| Entrez-Gene | 4338648 |