RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g31920.1 View Network Show in Genome Browser |
| Other Names | Os05g0384800 |
| Description | FYVE zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18586998-18595443 Nucleotide Length: 3261 |
| Protein-coding | LOC_Os05g31920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003682 | chromatin binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g24940 LOC_Os03g21540 |
| Downstream Genes | LOC_Os08g34950 LOC_Os06g22810 LOC_Os12g35290 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2864.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g31920.1 |
| Rice Genome Annotation | LOC_Os05g31920.1 |
| Ricechip | LOC_Os05g31920.1 |
| KEGG | osa:4338654 dosa:Os05t0384800-01 |
| Entrez-Gene | 4338654 |