RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32110.1 View Network Show in Genome Browser |
| Other Names | Os05g0386800 |
| Description | COBRA, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18721262-18723715 Nucleotide Length: 1374 |
| Protein-coding | LOC_Os05g32110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08370 LOC_Os04g59330 LOC_Os05g04820 LOC_Os05g03174 LOC_Os03g12250 LOC_Os03g57460 LOC_Os01g16030 LOC_Os01g70180 LOC_Os03g52630 LOC_Os04g33990 LOC_Os01g47780 More.. |
| Downstream Genes | LOC_Os07g10770 LOC_Os09g32080 LOC_Os06g03640 LOC_Os05g48900 LOC_Os05g32500 LOC_Os05g38720 LOC_Os06g11990 LOC_Os09g36350 LOC_Os07g14850 LOC_Os07g24190 LOC_Os12g25690 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32110.1 |
| Rice Genome Annotation | LOC_Os05g32110.1 |
| Ricechip | LOC_Os05g32110.1 |
| KEGG | osa:4338658 dosa:Os05t0386800-01 |
| Entrez-Gene | 4338658 |