RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32120.1 View Network Show in Genome Browser |
| Other Names | Os05g0386900 |
| Description | alpha 1,3-xylosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18728868-18731335 Nucleotide Length: 1059 |
| Protein-coding | LOC_Os05g32120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g57420 LOC_Os04g29920 LOC_Os03g56900 LOC_Os03g21840 LOC_Os03g61040 LOC_Os04g53770 |
| Downstream Genes | LOC_Os05g32130 LOC_Os08g17870 LOC_Os05g47690 LOC_Os05g45050 LOC_Os06g50860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32120.1 |
| Rice Genome Annotation | LOC_Os05g32120.1 |
| Ricechip | LOC_Os05g32120.1 |
| KEGG | osa:4338659 dosa:Os05t0386900-01 |
| Entrez-Gene | 4338659 |