RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32140.1 View Network Show in Genome Browser |
| Other Names | Os05g0387200 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18738597-18741960 Nucleotide Length: 1440 |
| Protein-coding | LOC_Os05g32140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14890 LOC_Os04g26910 LOC_Os04g51880 LOC_Os03g20120 LOC_Os01g12730 LOC_Os02g35020 LOC_Os04g39150 LOC_Os03g61710 LOC_Os04g43700 LOC_Os02g41520 LOC_Os01g51360 More.. |
| Downstream Genes | LOC_Os12g35290 LOC_Os08g43540 LOC_Os06g24704 LOC_Os10g20600 LOC_Os10g40640 LOC_Os05g35200 LOC_Os07g48830 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn00561 |
| Metacyc Pathways | PWY-401 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32140.1 |
| Rice Genome Annotation | LOC_Os05g32140.1 |
| Ricechip | LOC_Os05g32140.1 |
| KEGG | osa:4338660 dosa:Os05t0387200-01 |
| Entrez-Gene | 4338660 |