RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32220.1 View Network Show in Genome Browser |
| Other Names | Os05g0388500 |
| Description | L1P family of ribosomal proteins domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18789636-18793774 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os05g32220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17580 LOC_Os03g03020 LOC_Os03g52400 LOC_Os01g47330 LOC_Os03g61030 LOC_Os02g47140 LOC_Os02g24614 LOC_Os05g22830 LOC_Os04g16820 LOC_Os04g50990 LOC_Os05g22860 More.. |
| Downstream Genes | LOC_Os10g32870 LOC_Os05g49320 LOC_Os05g48050 LOC_Os07g43310 LOC_Os12g01710 LOC_Os10g35290 LOC_Os11g29190 LOC_Os08g07480 LOC_Os05g48422 LOC_Os09g19954 LOC_Os10g08930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32220.1 |
| Rice Genome Annotation | LOC_Os05g32220.1 |
| Ricechip | LOC_Os05g32220.1 |
| KEGG | osa:4338667 dosa:Os05t0388500-01 |
| Entrez-Gene | 4338667 |