RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32230.1 View Network Show in Genome Browser |
| Other Names | Os05g0388600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18796428-18802128 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os05g32230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g58090 LOC_Os02g56850 LOC_Os02g52700 LOC_Os05g23620 LOC_Os02g52710 LOC_Os03g18830 |
| Downstream Genes | LOC_Os07g04240 LOC_Os08g39140 LOC_Os11g38650 LOC_Os09g30418 LOC_Os09g30412 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32230.1 |
| Rice Genome Annotation | LOC_Os05g32230.1 |
| Ricechip | LOC_Os05g32230.1 |
| KEGG | osa:4338668 dosa:Os05t0388600-01 |
| Entrez-Gene | 4338668 |