RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32330.1 View Network Show in Genome Browser |
| Other Names | Os05g0389500 |
| Description | endonuclease/exonuclease/phosphatase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18845942-18849942 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os05g32330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14780 LOC_Os01g08780 LOC_Os03g22350 LOC_Os01g51890 LOC_Os03g38960 LOC_Os01g59140 LOC_Os04g41490 LOC_Os04g23820 LOC_Os03g28960 LOC_Os04g58210 LOC_Os05g22940 More.. |
| Downstream Genes | LOC_Os09g36530 LOC_Os07g16950 LOC_Os07g29420 LOC_Os07g27930 LOC_Os05g45900 LOC_Os08g43640 LOC_Os09g37000 LOC_Os12g03720 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32330.1 |
| Rice Genome Annotation | LOC_Os05g32330.1 |
| Ricechip | LOC_Os05g32330.1 |
| KEGG | osa:4338672 dosa:Os05t0389500-01 |
| Entrez-Gene | 4338672 |