RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32380.1 View Network Show in Genome Browser |
| Other Names | Os05g0390000 |
| Description | phospholipase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18880611-18887896 Nucleotide Length: 1734 |
| Protein-coding | LOC_Os05g32380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g28040 LOC_Os01g67420 LOC_Os01g43140 LOC_Os02g54010 LOC_Os01g20840 LOC_Os01g47760 LOC_Os01g59110 LOC_Os01g59100 |
| Downstream Genes | LOC_Os09g22450 LOC_Os05g48930 LOC_Os09g39790 LOC_Os11g09010 LOC_Os06g14490 |
| Pathways | |
|---|---|
| Metacyc Pathways | LIPAS-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32380.1 |
| Rice Genome Annotation | LOC_Os05g32380.1 |
| Ricechip | LOC_Os05g32380.1 |
| KEGG | osa:4338677 dosa:Os05t0390000-01 |
| Entrez-Gene | 4338677 |