RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32430.2 View Network Show in Genome Browser |
| Other Names | Os05g0390500 |
| Description | NLI interacting factor-like phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 18928206-18932374 Nucleotide Length: 1239 |
| Protein-coding | LOC_Os05g32430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05860 LOC_Os01g55700 LOC_Os03g60130 LOC_Os03g44484 LOC_Os01g47540 LOC_Os03g63300 LOC_Os01g08970 LOC_Os02g03340 LOC_Os03g14720 LOC_Os03g52750 LOC_Os03g22570 More.. |
| Downstream Genes | LOC_Os10g10990 LOC_Os05g43770 LOC_Os07g12630 LOC_Os07g10690 LOC_Os12g35030 LOC_Os06g10620 LOC_Os09g36440 LOC_Os07g43060 LOC_Os10g02630 LOC_Os07g07610 LOC_Os05g43450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32430.2 |
| Rice Genome Annotation | LOC_Os05g32430.2 |
| Ricechip | LOC_Os05g32430.2 |
| KEGG | osa:4338679 dosa:Os05t0390500-01 |
| Entrez-Gene | 4338679 |