RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g32710.1 View Network Show in Genome Browser |
| Other Names | Os05g0393700 |
| Description | Alpha amylase, catalytic domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19154970-19157600 Nucleotide Length: 2403 |
| Protein-coding | LOC_Os05g32710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32660 LOC_Os04g33460 LOC_Os02g56320 LOC_Os02g51070 LOC_Os01g63270 LOC_Os01g52250 LOC_Os04g53310 LOC_Os03g55090 LOC_Os03g52460 LOC_Os01g44220 LOC_Os04g52230 More.. |
| Downstream Genes | LOC_Os06g26234 LOC_Os06g51084 LOC_Os05g45720 LOC_Os10g30156 LOC_Os07g22930 LOC_Os06g04200 LOC_Os06g06560 LOC_Os06g12450 LOC_Os07g43390 LOC_Os08g09230 LOC_Os07g46790 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2661 PWY-842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g32710.1 |
| Rice Genome Annotation | LOC_Os05g32710.1 |
| Ricechip | LOC_Os05g32710.1 |
| KEGG | osa:4338695 dosa:Os05t0393700-01 |
| Entrez-Gene | 4338695 |