RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33010.1 View Network Show in Genome Browser |
| Other Names | Os05g0397800 |
| Description | heat shock protein DnaJ, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19346026-19353385 Nucleotide Length: 381 |
| Protein-coding | LOC_Os05g33010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39870 LOC_Os04g35180 LOC_Os05g23740 LOC_Os02g48110 LOC_Os05g08840 LOC_Os03g11910 LOC_Os01g08560 LOC_Os02g02410 LOC_Os03g16880 LOC_Os05g30480 LOC_Os03g50250 More.. |
| Downstream Genes | LOC_Os12g38180 LOC_Os11g47760 LOC_Os06g46600 LOC_Os09g11250 LOC_Os12g14070 LOC_Os08g25090 LOC_Os11g08460 LOC_Os09g31486 LOC_Os12g05760 LOC_Os05g51360 LOC_Os08g09770 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33010.1 |
| Rice Genome Annotation | LOC_Os05g33010.1 |
| Ricechip | LOC_Os05g33010.1 |
| KEGG | osa:9271739 dosa:Os05t0397800-01 |
| Entrez-Gene | 9271739 |