RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33040.3 View Network Show in Genome Browser |
| Other Names | Os05g0398000 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19363632-19365849 Nucleotide Length: 711 |
| Protein-coding | LOC_Os05g33040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g41100 LOC_Os03g02680 LOC_Os01g72790 LOC_Os05g01310 LOC_Os01g32660 LOC_Os05g32360 LOC_Os03g17700 LOC_Os03g12414 LOC_Os05g32600 LOC_Os03g52750 LOC_Os01g27940 More.. |
| Downstream Genes | LOC_Os12g30020 LOC_Os11g48030 LOC_Os12g31810 LOC_Os06g51110 LOC_Os05g41390 LOC_Os12g39830 LOC_Os06g06090 LOC_Os09g29100 LOC_Os08g37390 LOC_Os08g32540 LOC_Os08g42020 More.. |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33040.3 |
| Rice Genome Annotation | LOC_Os05g33040.3 |
| Ricechip | LOC_Os05g33040.3 |
| KEGG | osa:4338711 dosa:Os05t0398000-01 |
| Entrez-Gene | 4338711 |