RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33100.1 View Network Show in Genome Browser |
| Other Names | Os05g0399100 |
| Description | endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19409584-19413591 Nucleotide Length: 723 |
| Protein-coding | LOC_Os05g33100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27310 LOC_Os02g54890 |
| Downstream Genes | LOC_Os07g06080 LOC_Os06g04030 LOC_Os10g41410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33100.1 |
| Rice Genome Annotation | LOC_Os05g33100.1 |
| Ricechip | LOC_Os05g33100.1 |
| KEGG | osa:4338716 dosa:Os05t0399100-01 |
| Entrez-Gene | 4338716 |