RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33230.1 View Network Show in Genome Browser |
| Other Names | Os05g0400600 |
| Description | cobalt ion transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19482864-19488728 Nucleotide Length: 1167 |
| Protein-coding | LOC_Os05g33230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56400 LOC_Os05g19954 LOC_Os03g60100 LOC_Os03g26860 LOC_Os01g42640 LOC_Os05g15360 LOC_Os01g62210 LOC_Os03g26440 LOC_Os02g44810 LOC_Os03g55930 LOC_Os03g49710 More.. |
| Downstream Genes | LOC_Os11g29850 LOC_Os07g46440 LOC_Os06g39700 LOC_Os06g45250 LOC_Os05g38580 LOC_Os12g09290 LOC_Os09g07910 LOC_Os08g21840 LOC_Os12g13380 LOC_Os11g20790 LOC_Os06g10200 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33230.1 |
| Rice Genome Annotation | LOC_Os05g33230.1 |
| Ricechip | LOC_Os05g33230.1 |
| KEGG | osa:4338725 dosa:Os05t0400600-01 |
| Entrez-Gene | 4338725 |