RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g33260.3 View Network Show in Genome Browser |
| Other Names | Os05g0400800 |
| Description | 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 19490677-19497600 Nucleotide Length: 477 |
| Protein-coding | LOC_Os05g33260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15120 LOC_Os04g52710 LOC_Os03g54230 LOC_Os01g16940 LOC_Os03g01230 LOC_Os03g04169 LOC_Os01g13190 LOC_Os02g16630 LOC_Os04g39270 LOC_Os01g72240 LOC_Os01g38970 More.. |
| Downstream Genes | LOC_Os07g45360 LOC_Os06g06410 LOC_Os12g37370 LOC_Os09g32810 LOC_Os07g08430 LOC_Os12g03822 LOC_Os11g03990 LOC_Os11g16430 LOC_Os06g38940 LOC_Os10g10434 LOC_Os10g41470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g33260.3 |
| Rice Genome Annotation | LOC_Os05g33260.3 |
| Ricechip | LOC_Os05g33260.3 |
| KEGG | osa:9270806 dosa:Os05t0400800-02 |
| Entrez-Gene | 9270806 |